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Escherichia albertii is a recently described species that has been associated with gastroenteritis in humans and with healthy and ill birds. Most recently, it has been identified as the causative agent in a food-borne outbreak in Japan. The distribution and clinical importance of E. albertii are not well studied because its importance is unclear. Culture methods for clinical isolation frequently miss E. albertii or incorrectly identify it as Shigella spp., Escherichia coli, or Hafnia alvei. This study was designed to determine if E. albertii could be recovered from chicken carcass rinses collected at slaughter during a 1-year period from November 2009 until October 2010. Colonies were isolated from chicken carcass rinses and tested by PCR for the presence or absence of clpX, lysP, mdh, intimin (eae), Shiga toxins 1 and 2 (stx1, stx2, and stx2f), heat-stable enterotoxin A (staA), and cytolethal distending toxins 1 and 2 (cdtB) genes. Sixty-five isolates were analyzed by sequencing a section of the rpoB gene. Analysis of the rpoB gene sequences revealed 14 fixed differences between E. albertii and other, closely related organisms. The fixed differences found in the rpoB gene could aid in future discrimination of E. albertii from closely related bacteria.

Titel:	Evaluating the occurrence of Escherichia albertii in chicken carcass rinses by PCR, Vitek analysis, and sequencing of the rpoB gene.
Autor/in / Beteiligte Person:	Lindsey, RL ; Fedorka-Cray, PJ ; Abley, M ; Turpin, JB ; Meinersmann, RJ
Link:	Full Text Finder (Volltext)
Zeitschrift:	Applied and environmental microbiology, Jg. 81 (2015-03-01), Heft 5, S. 1727-34
Veröffentlichung:	Washington, American Society for Microbiology., 2015
Medientyp:	academicJournal
ISSN:	1098-5336 (electronic)
DOI:	10.1128/AEM.03681-14
Schlagwort:	Animals Bacterial Typing Techniques methods DNA-Directed RNA Polymerases genetics Escherichia coli genetics Escherichia coli physiology Genotype Japan Molecular Sequence Data Chickens microbiology Escherichia coli classification Escherichia coli isolation & purification Food Microbiology Polymerase Chain Reaction methods Sequence Analysis, DNA methods
Sonstiges:	Nachgewiesen in: MEDLINE Sprachen: English Publication Type: Journal Article Language: English [Appl Environ Microbiol] 2015 Mar; Vol. 81 (5), pp. 1727-34. <i>Date of Electronic Publication: </i>2014 Dec 29. MeSH Terms: Food Microbiology* ; Chickens / microbiology ; Escherichia coli / classification ; Escherichia coli / isolation & purification ; Polymerase Chain Reaction / methods ; Sequence Analysis, DNA / *methods ; Animals ; Bacterial Typing Techniques / methods ; DNA-Directed RNA Polymerases / genetics ; Escherichia coli / genetics ; Escherichia coli / physiology ; Genotype ; Japan ; Molecular Sequence Data References: J Food Prot. 2013 Jan;76(1):124-8. (PMID: 23317867) ; Int J Syst Evol Microbiol. 2008 Aug;58(Pt 8):1807-14. (PMID: 18676461) ; FEMS Microbiol Lett. 2006 Oct;263(2):142-7. (PMID: 16978348) ; Emerg Infect Dis. 2010 Apr;16(4):638-46. (PMID: 20350378) ; J Microbiol. 2011 Oct;49(5):747-52. (PMID: 22068490) ; Appl Environ Microbiol. 2009 Apr;75(7):1908-15. (PMID: 19181840) ; J Bacteriol. 2005 Jan;187(2):619-28. (PMID: 15629933) ; J Clin Microbiol. 1999 Aug;37(8):2399-401. (PMID: 10405374) ; J Clin Microbiol. 2004 Sep;42(9):3925-31. (PMID: 15364970) ; Genome Announc. 2014 Jan 30;2(1):null. (PMID: 24482506) ; Appl Environ Microbiol. 2003 Nov;69(11):6740-9. (PMID: 14602635) ; Int J Syst Evol Microbiol. 2004 Jul;54(Pt 4):1393-9. (PMID: 15280320) ; Mol Phylogenet Evol. 2007 Aug;44(2):699-710. (PMID: 17267242) ; Curr Opin Struct Biol. 2001 Apr;11(2):155-62. (PMID: 11297923) ; Infect Immun. 1991 Apr;59(4):1507-13. (PMID: 2004829) ; Microb Ecol. 2010 Nov;60(4):708-20. (PMID: 20623278) ; J Clin Microbiol. 2012 Sep;50(9):2951-63. (PMID: 22760050) ; J Clin Microbiol. 2003 Dec;41(12):5699-708. (PMID: 14662964) ; J Clin Microbiol. 2006 Mar;44(3):827-32. (PMID: 16517861) ; J Clin Microbiol. 2005 Apr;43(4):1934-6. (PMID: 15815024) ; Jpn J Infect Dis. 2012;65(3):203-7. (PMID: 22627300) ; Mol Microbiol. 1997 Dec;26(5):1005-11. (PMID: 9426137) ; Int J Syst Evol Microbiol. 2006 Dec;56(Pt 12):2743-51. (PMID: 17158971) ; J Clin Microbiol. 2003 Sep;41(9):4285-91. (PMID: 12958258) ; Clin Microbiol Rev. 2006 Jan;19(1):12-8. (PMID: 16418520) ; Methods Mol Biol. 2000;132:365-86. (PMID: 10547847) ; FEMS Microbiol Lett. 2003 Sep 26;226(2):299-305. (PMID: 14553926) ; Int J Syst Evol Microbiol. 2003 May;53(Pt 3):807-10. (PMID: 12807204) ; Zoonoses Public Health. 2009 Jun;56(5):229-37. (PMID: 19068073) ; J Med Microbiol. 1992 Nov;37(5):310-4. (PMID: 1433251) ; J Clin Microbiol. 2003 Oct;41(10):4852-4. (PMID: 14532241) ; Genetics. 1997 Mar;145(3):833-46. (PMID: 9055092) ; Trends Microbiol. 2009 Jan;17(1):37-45. (PMID: 19081723) ; Emerg Infect Dis. 2012 Mar;18(3):488-92. (PMID: 22377117) ; Emerg Infect Dis. 2013 Jan;19(1):144-6. (PMID: 23260717) ; J Clin Microbiol. 1998 Jun;36(6):1795-7. (PMID: 9620426) ; Diagn Microbiol Infect Dis. 2005 Mar;51(3):151-63. (PMID: 15766600) ; J Appl Microbiol. 2014 Aug;117(2):597-609. (PMID: 24849008) ; Nucleic Acids Res. 1997 Sep 1;25(17):3389-402. (PMID: 9254694) ; Diagn Microbiol Infect Dis. 2013 Oct;77(2):91-5. (PMID: 23938305) Molecular Sequence: GENBANK KP090209; KP090210; KP090211; KP090212; KP100164 Substance Nomenclature: EC 2.7.7.6 (DNA-Directed RNA Polymerases) ; EC 2.7.7.6 (RNA polymerase beta subunit) Entry Date(s): Date Created: 20141231 Date Completed: 20151027 Latest Revision: 20181113 Update Code: 20231215 PubMed Central ID: PMC4325149

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Evaluating the occurrence of Escherichia albertii in chicken carcass rinses by PCR, Vitek analysis, and sequencing of the rpoB gene.