Einzeltreffer — DigiBib

Seahorses have a specialized morphology that includes a toothless tubular mouth, a body covered with bony plates, a male brood pouch, and the absence of caudal and pelvic fins. Here we report the sequencing and de novo assembly of the genome of the tiger tail seahorse, Hippocampus comes. Comparative genomic analysis identifies higher protein and nucleotide evolutionary rates in H. comes compared with other teleost fish genomes. We identified an astacin metalloprotease gene family that has undergone expansion and is highly expressed in the male brood pouch. We also find that the H. comes genome lacks enamel matrix protein-coding proline/glutamine-rich secretory calcium-binding phosphoprotein genes, which might have led to the loss of mineralized teeth. tbx4, a regulator of hindlimb development, is also not found in H. comes genome. Knockout of tbx4 in zebrafish showed a 'pelvic fin-loss' phenotype similar to that of seahorses.

Titel:	The seahorse genome and the evolution of its specialized morphology.
Autor/in / Beteiligte Person:	Lin, Q ; Fan, S ; Zhang, Y ; Xu, M ; Zhang, H ; Yang, Y ; Lee, AP ; Woltering, JM ; Ravi, V ; Gunter, HM ; Luo, W ; Gao, Z ; Lim, ZW ; Qin, G ; Schneider, RF ; Wang, X ; Xiong, P ; Li, G ; Wang, K ; Min, J ; Zhang, C ; Qiu, Y ; Bai, J ; He, W ; Bian, C ; Zhang, X ; Shan, D ; Qu, H ; Sun, Y ; Gao, Q ; Huang, L ; Shi, Q ; Meyer, A ; Venkatesh, B
Link:	View record at Springer (Volltext)
Zeitschrift:	Nature, Jg. 540 (2016-12-14), Heft 7633, S. 395-399
Veröffentlichung:	Basingstoke : Nature Publishing Group ; <i>Original Publication</i>: London, Macmillan Journals ltd., 2016
Medientyp:	academicJournal
ISSN:	1476-4687 (electronic)
DOI:	10.1038/nature20595
Schlagwort:	Animal Fins anatomy & histology Animal Fins metabolism Animals Conserved Sequence genetics Fish Proteins deficiency Gene Deletion Genomics Hindlimb anatomy & histology Hindlimb metabolism Male Molecular Sequence Annotation Multigene Family genetics Mutation Rate Phylogeny Reproduction physiology T-Box Domain Proteins deficiency T-Box Domain Proteins genetics Time Factors Zebrafish Proteins deficiency Zebrafish Proteins genetics Biological Evolution Fish Proteins genetics Genome genetics Smegmamorpha anatomy & histology Smegmamorpha genetics
Sonstiges:	Nachgewiesen in: MEDLINE Sprachen: English Publication Type: Journal Article; Research Support, Non-U.S. Gov't Language: English [Nature] 2016 Dec 14; Vol. 540 (7633), pp. 395-399. MeSH Terms: Biological Evolution* ; Fish Proteins / genetics ; Genome / genetics ; Smegmamorpha / anatomy & histology ; Smegmamorpha / genetics ; Animal Fins / anatomy & histology ; Animal Fins / metabolism ; Animals ; Conserved Sequence / genetics ; Fish Proteins / deficiency ; Gene Deletion ; Genomics ; Hindlimb / anatomy & histology ; Hindlimb / metabolism ; Male ; Molecular Sequence Annotation ; Multigene Family / genetics ; Mutation Rate ; Phylogeny ; Reproduction / physiology ; T-Box Domain Proteins / deficiency ; T-Box Domain Proteins / genetics ; Time Factors ; Zebrafish Proteins / deficiency ; Zebrafish Proteins / genetics Comments: Comment in: Nature. 2016 Dec 14;540(7633):316. (PMID: 27974783) References: Bioinformatics. 2006 Nov 1;22(21):2688-90. (PMID: 16928733) ; Genetics. 1989 Nov;123(3):585-95. (PMID: 2513255) ; Gigascience. 2012 Dec 27;1(1):18. (PMID: 23587118) ; Nature. 2011 Oct 12;478(7370):476-82. (PMID: 21993624) ; Cells Tissues Organs. 2011;194(2-4):108-12. (PMID: 21576905) ; Bioinformatics. 2009 Aug 1;25(15):1972-3. (PMID: 19505945) ; Dev Biol. 2005 May 15;281(2):227-39. (PMID: 15893975) ; J Hered. 2001 Mar-Apr;92(2):159-66. (PMID: 11396574) ; Genome Res. 2002 Apr;12(4):656-64. (PMID: 11932250) ; Nature. 2011 Mar 10;471(7337):216-9. (PMID: 21390129) ; J Exp Biol. 2008 Sep;211(Pt 18):2931-42. (PMID: 18775930) ; Dev Biol. 2009 Mar 15;327(2):526-40. (PMID: 19073165) ; Nat Genet. 1998 May;19(1):70-3. (PMID: 9590293) ; J Exp Zool B Mol Dev Evol. 2014 Sep;322(6):390-402. (PMID: 25243252) ; Nature. 1999 Apr 29;398(6730):814-8. (PMID: 10235264) ; Bioinformatics. 2009 May 1;25(9):1105-11. (PMID: 19289445) ; Science. 2010 Jan 15;327(5963):302-5. (PMID: 20007865) ; Hum Mol Genet. 2007 Jan 15;16(2):210-22. (PMID: 17200153) ; Mol Biol Evol. 2007 Aug;24(8):1586-91. (PMID: 17483113) ; Mech Dev. 1999 Sep;87(1-2):181-4. (PMID: 10495283) ; Proc Natl Acad Sci U S A. 2006 Dec 19;103(51):19407-12. (PMID: 17158805) ; Nat Biotechnol. 2011 May 15;29(7):644-52. (PMID: 21572440) ; Nat Genet. 2008 Feb;40(2):158-60. (PMID: 18176564) ; Trends Ecol Evol. 2011 Dec;26(12 ):663-73. (PMID: 21978465) ; Science. 2014 Dec 12;346(6215):1311-20. (PMID: 25504712) ; Biol Open. 2016 Feb 18;5(3):359-66. (PMID: 26892237) ; Nucleic Acids Res. 2004 Mar 19;32(5):1792-7. (PMID: 15034147) ; J Fish Biol. 2011 Jun;78(6):1799-823. (PMID: 21651529) ; Nat Biotechnol. 2010 May;28(5):495-501. (PMID: 20436461) ; Cell. 2016 Jan 14;164(1-2):45-56. (PMID: 26774823) ; Mol Biol Evol. 2015 Dec;32(12):3114-31. (PMID: 26330546) ; Nucleic Acids Res. 2006;34(17):4925-36. (PMID: 16982645) ; Genome Res. 2004 May;14(5):988-95. (PMID: 15123596) ; PLoS Genet. 2012;8(8):e1002866. (PMID: 22876201) ; Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):13904-9. (PMID: 23918387) ; Mol Phylogenet Evol. 2004 Feb;30(2):273-86. (PMID: 14715220) ; Genome Res. 2004 Apr;14(4):708-15. (PMID: 15060014) ; Dev Genes Evol. 2006 Dec;216(12):769-84. (PMID: 17016731) ; J Fish Biol. 2010 Oct;77(6):1173-208. (PMID: 21039499) ; Science. 2014 Dec 12;346(6215):1254390. (PMID: 25504730) ; Sci Rep. 2016 Apr 19;6:24501. (PMID: 27089831) ; Brief Bioinform. 2011 Jan;12(1):41-51. (PMID: 21278375) ; Syst Biol. 2008 Feb;57(1):15-37. (PMID: 18266181) ; Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12738-43. (PMID: 23858462) ; Syst Biol. 2008 Oct;57(5):758-71. (PMID: 18853362) ; Nat Genet. 2007 Oct;39(10):1261-5. (PMID: 17828264) ; Science. 2006 Dec 22;314(5807):1892. (PMID: 17185593) ; Development. 2003 Jun;130(12):2681-93. (PMID: 12736212) ; J Exp Zool B Mol Dev Evol. 2015 Jan;324(1):41-50. (PMID: 25504928) ; Bioinformatics. 2004 Jan 22;20(2):289-90. (PMID: 14734327) ; Bioessays. 2007 Sep;29(9):884-96. (PMID: 17691105) ; Proc Natl Acad Sci U S A. 2003 May 13;100(10):5885-90. (PMID: 12721359) ; Science. 2004 May 28;304(5675):1321-5. (PMID: 15131266) ; Nature. 2014 Jan 9;505(7482):174-9. (PMID: 24402279) ; Science. 2013 Oct 25;342(6157):1241006. (PMID: 24159046) Substance Nomenclature: 0 (Fish Proteins) ; 0 (T-Box Domain Proteins) ; 0 (Zebrafish Proteins) ; 0 (tbx4 protein, zebrafish) Entry Date(s): Date Created: 20161216 Date Completed: 20170329 Latest Revision: 20210602 Update Code: 20240513 PubMed Central ID: PMC8127814

Klicken Sie ein Format an und speichern Sie dann die Daten oder geben Sie eine Empfänger-Adresse ein und lassen Sie sich per Email zusenden.

BibTeX Citavi, JabRef, u.a.
(Literaturverwaltung)

PDF kein Volltext!
(Merkzettel, Notizen)

RIS Endnote, Citavi u.a.
(Literaturverwaltung)

MODS
(XML zur Weiterverarbeitung)

oder

Wählen Sie das für Sie passende Zitationsformat und kopieren Sie es dann in die Zwischenablage, lassen es sich per Mail zusenden oder speichern es als PDF-Datei.

Gewünschter Zitations-Stil:

oder

Bitte prüfen Sie, ob die Zitation formal korrekt ist, bevor Sie sie in einer Arbeit verwenden. Benutzen Sie gegebenenfalls den "Exportieren"-Dialog, wenn Sie ein Literaturverwaltungsprogramm verwenden und die Zitat-Angaben selbst formatieren wollen.

The seahorse genome and the evolution of its specialized morphology.