Identification and in silico structural analysis of Gallus gallus protein arginine methyltransferase 4 ( PRMT4)
In: FEBS Open Bio, Jg. 7 (2017), Heft 12, S. 1909-1923
academicJournal
Zugriff:
Protein arginine methyltransferase 4 ( PRMT 4) is an essential epigenetic regulator of fundamental and conserved processes during vertebrate development, such as pluripotency and differentiation. Surprisingly, PRMT 4 homologs have been identified in nearly all vertebrate classes except the avian genome. This raises the possibility that in birds PRMT 4 functions are taken over by other PRMT family members. Here, we reveal the existence of a bona fide PRMT 4 homolog in the chicken, Gallus gallus . Using a biochemical approach, we initially purified a putative chicken PRMT 4 protein and thus provided the first evidence for the presence of an endogenous PRMT 4‐specific enzymatic activity toward histone H3 arginine 17 (H3R17) in avian cells. We then isolated a G. gallus PRMT 4 (gg PRMT 4 ) transcript encompassing the complete open reading frame. Recombinant gg PRMT 4 possesses intrinsic methyltransferase activity toward H3R17. CRISPR /Cas9‐mediated deletion of gg PRMT 4 demonstrated that the transcript identified here encodes avian PRMT 4. Combining protein–protein docking and homology modeling based on published crystal structures of murine PRMT 4, we found a strong structural similarity of the catalytic core domain between chicken and mammalian PRMT 4. Strikingly, in silico structural comparison of the N‐terminal Pleckstrin homology ( PH ) domain of avian and murine PRMT 4 identified strictly conserved amino acids that are involved in an interaction interface toward the catalytic core domain, facilitating for the first time a prediction of the relative spatial arrangement of these two domains. Our novel findings are particularly exciting in light of the essential function of the PH domain in substrate recognition and methylation by PRMT 4.
Titel: |
Identification and in silico structural analysis of Gallus gallus protein arginine methyltransferase 4 ( PRMT4)
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Autor/in / Beteiligte Person: | Berberich, Hannah ; Terwesten, Felix ; Rakow, Sinja ; Sahu, Peeyush ; Bouchard, Caroline ; Meixner, Marion ; Philipsen, Sjaak ; Kolb, Peter ; Bauer, Uta‐Maria ; Forschungsgemeinschaft, Deutsche ; José Carreras Leukämie-Stiftung ; Landsteiner Foundation for Blood Transfusion Research |
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Zeitschrift: | FEBS Open Bio, Jg. 7 (2017), Heft 12, S. 1909-1923 |
Veröffentlichung: | Wiley, 2017 |
Medientyp: | academicJournal |
ISSN: | 2211-5463 |
DOI: | 10.1002/2211-5463.12323 |
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