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Methods and compositions for use of therapeutic T cells in combination with kinase inhibitors

Juno Therapeutics, Inc. ; ACERTA PHARMA, LLC ; et al.
2023
Online Patent

Titel:
Methods and compositions for use of therapeutic T cells in combination with kinase inhibitors
Autor/in / Beteiligte Person: Juno Therapeutics, Inc. ; ACERTA PHARMA, LLC ; ACERTA PHARMA B.V.
Link:
Veröffentlichung: 2023
Medientyp: Patent
Sonstiges:
  • Nachgewiesen in: USPTO Patent Grants
  • Sprachen: English
  • Patent Number: 11590,167
  • Publication Date: February 28, 2023
  • Appl. No: 16/465542
  • Application Filed: December 01, 2017
  • Assignees: Juno Therapeutic, Inc. (Seattle, WA, US), ACERTA PHARMA B.V. (AB Oss, NL)
  • Claim: 1. A method of treatment of a cancer, the method comprising: (1) administering, to a subject having a cancer, T cells expressing a recombinant antigen receptor that specifically binds to an antigen associated with the cancer; and (2) administering to the subject a kinase inhibitor or a pharmaceutical composition comprising the inhibitor, wherein the inhibitor is the compound of Formula (II): [chemical expression included]   or an enantiomer, pharmaceutically acceptable salt, solvate, hydrate, or prodrug thereof.
  • Claim: 2. The method of claim 1 , wherein: (i) the subject or the cancer (a) is resistant to ibrutinib or (b) comprises a population of cells that are resistant to ibrutinib; (ii) the subject or the cancer comprises a mutation or disruption in a nucleic acid encoding Bruton's tyrosine kinase (BTK), capable of reducing or preventing inhibition of the BTK by ibrutinib; or (iii) at the time of the administration in (1) and at the time of the administration in (2) the subject has relapsed following remission after treatment with, or been deemed refractory to treatment with ibrutinib.
  • Claim: 3. The method of claim 2 , wherein the mutation in the nucleic acid encoding BTK comprises a C481S or C481R substitution, or a T474I or T474M substitution.
  • Claim: 4. The method of claim 1 , wherein the cancer is selected from the group consisting of sarcomas, carcinomas, lymphomas, non-Hodgkin lymphomas (NHLs), diffuse large B cell lymphoma (DLBCL), leukemia, CLL, ALL, AML and myeloma.
  • Claim: 5. The method of claim 1 , wherein the T cells recognize an antigen selected from ROR1, B cell maturation antigen (BCMA), tEGFR, Her2, L1-CAM, CD19, CD20, CD22, mesothelin, CEA, and hepatitis B surface antigen, anti-folate receptor, CD23, CD24, CD30, CD33, CD38, CD44, EGFR, EGP-2, EGP-4, EPHa2, ErbB2, 3, or 4, erbB dimers, EGFR vIII, FBP, FCRL5, FCRH5, fetal acethycholine e receptor, GD2, GD3, HMW-MAA, IL-22R-alpha, IL-13R-alpha2, kdr, kappa light chain, Lewis Y, L1-cell adhesion molecule, (L1-CAM), Melanoma-associated antigen (MAGE)-A1, MAGE-A3, MAGE-A6, Preferentially expressed antigen of melanoma (PRAME), survivin, EGP2, EGP40, TAG72, B7-H6, IL-13 receptor a2 (IL-13Ra2), CA9, GD3, HMW-MAA, CD171, G250/CAIX, HLA-AI MAGE Al, HLA-A2 NY-ESO-1, PSCA, folate receptor-a, CD44v6, CD44v7/8, avb6 integrin, 8H9, NCAM, VEGF receptors, 5T4, Fetal AchR, NKG2D ligands, CD44v6, dual antigen, and an antigen associated with a universal tag, a cancer-testes antigen, mesothelin, MUC1, MUC16, PSCA, NKG2D Ligands, NY-ESO-1, MART-1, gp100, oncofetal antigen, ROR1, TAG72, VEGF-R2, carcinoembryonic antigen (CEA), prostate specific antigen, PSMA, Her2/neu, estrogen receptor, progesterone receptor, ephrinB2, CD123, c-Met, GD-2, 0-acetylated GD2 (OGD2), CE7, Wilms Tumor 1 (WT-1), a cyclin, cyclin A2, CCL-1, CD138, and a pathogen-specific antigen.
  • Claim: 6. The method of claim 1 , wherein the T cells comprise tumor infiltrating lymphocytes (TILs) or comprise genetically engineered T cells expressing a recombinant receptor that specifically binds to an antigen associated with the cancer.
  • Claim: 7. The method of claim 6 , wherein the T cells are genetically engineered T cells expressing a recombinant receptor and the recombinant receptor is a transgenic T cell receptor (TCR) or a chimeric antigen receptor (CAR).
  • Claim: 8. The method of claim 7 , wherein the recombinant receptor is a CAR and the CAR comprises an extracellular antigen-recognition domain that specifically binds to the antigen and an intracellular signaling domain comprising an ITAM.
  • Claim: 9. The method of claim 8 , wherein the intracellular signaling domain comprises an intracellular domain of a CD3-zeta (CD3ζ) chain.
  • Claim: 10. The method of claim 8 , wherein the chimeric antigen receptor (CAR) further comprises a costimulatory signaling region.
  • Claim: 11. The method of claim 10 , wherein the costimulatory signaling region comprises a signaling domain of CD28 or 4-1BB.
  • Claim: 12. The method of claim 1 , wherein the inhibitor irreversibly reduces or eliminates the activation of the target protein tyrosine kinase, specifically binds to a binding site in the active site of the target protein tyrosine kinase comprising an amino acid residue corresponding to residue C481 in the sequence set forth in SEQ ID NO:18, or reduces or eliminates autophosphorylation activity of the target protein tyrosine kinase.
  • Claim: 13. The method of claim 1 , wherein the inhibitor is administered concurrently with or subsequently to initiation of administration of the T cells.
  • Claim: 14. The method of claim 1 , wherein the inhibitor is administered subsequently to initiation of administration of the T cells.
  • Claim: 15. The method of claim 14 , wherein the inhibitor is administered within, or within about 1 week of the initiation of the administration of the T cells.
  • Claim: 16. The method of claim 1 , wherein the inhibitor is administered orally.
  • Claim: 17. The method of claim 1 , wherein the inhibitor is administered at a total daily dosage amount of between 50 mg/day and 250 mg/day.
  • Claim: 18. The method of claim 1 , wherein the inhibitor is administered in an amount that is about 200 mg/day.
  • Claim: 19. The method of claim 1 , wherein the administered T cells comprise CD4+T cells, CD8+T cells, or CD4+T cells and CD8+T cells.
  • Claim: 20. The method of claim 1 , wherein the administered T cells comprise administration of a dose comprising a number of cells between at or about 5×10 5 cells/kg body weight of the subject and at or about 1×10 7 cells/kg body weight of the subject.
  • Claim: 21. The method of claim 1 , wherein the administered T cells comprise administration of a dose comprising a number of cells between at or about 1×10 7 and at or about 2×10 8 total T cells comprising the recombinant receptor.
  • Claim: 22. The method of claim 1 , wherein the method further comprises administering a lymphodepleting chemotherapy prior to administration of the T cells.
  • Claim: 23. The method of claim 1 , wherein the method further comprises administering an immune modulatory agent to the subject, wherein the administration of the cells and the administration of the immune modulatory agent are carried out simultaneously, separately or in a single composition, or sequentially, in either order.
  • Claim: 24. The method of claim 1 , wherein the administered T cells exhibit increased or prolonged expansion or persistence in the subject as compared to a method in which the administered T cells are administered to the subject in the absence of the inhibitor.
  • Claim: 25. The method of claim 1 , wherein the method reduces tumor burden to a greater degree or for a greater period of time as compared to the reduction that would be observed with a comparable method in which the administered T cells are administered to the subject in the absence of the inhibitor.
  • Claim: 26. The method of claim 10 , wherein the costimulatory domain is a domain of 4-1BB.
  • Claim: 27. The method of claim 1 , wherein the inhibitor is administered for a time period up to 1 year after initiation of the administration of the T cells.
  • Claim: 28. The method of claim 27 , wherein the inhibitor is administered up to 3 months after initiation of the administration of the T cells.
  • Claim: 29. The method of claim 1 , wherein the inhibitor is administered orally.
  • Claim: 30. The method of claim 1 , wherein the inhibitor is administered twice a day.
  • Claim: 31. The method of claim 27 , wherein the inhibitor is administered twice a day.
  • Claim: 32. The method of claim 1 , wherein the administered T cells comprise cells that are autologous to the subject.
  • Claim: 33. The method of claim 22 , wherein the lymphodepleting chemotherapy comprises administering fludarabine or cyclophosphamide to the subject.
  • Claim: 34. The method of claim 5 , wherein the antigen is CD19.
  • Claim: 35. The method of claim 1 , wherein the inhibitor is administered before initiation of administration of the T cells.
  • Claim: 36. The method of claim 1 , wherein the inhibitor is administered twice a day for a cycle of 7, 14, 21, 28, 35 or 42 days.
  • Claim: 37. The method of claim 1 , wherein the inhibitor is administered for 1 to 24 cycles.
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Dec. 2016;30(6):1229-1237. cited by applicant ; Young et al., “Potent and selective Bruton's tyrosine kinase inhibitors: discovery of GDC-0834,” Bioorg Med Chem Lett (2015) 25(6):1333-1337. cited by applicant ; Zhao et al., “Structural Design of Engineered Costimulation Determines Tumor Rejection Kinetics and Persistence of Car T Cells,” Cancer Cell (2015) 28(4):415-428. cited by applicant ; Zhong et al., “Targeting interleukin-2-inducible T-cell kinase (ITK) and resting Tymphocyte kinase (RLK) using a novel covalent inhibitor PRN694,” J Biol Chem (2015) 290(10):5960-5978. cited by applicant ; Zhou et al., “Novel mutant-selective EGFR kinase inhibitors against EGFR T790M,” Nature (2009) 432(7276):1070-1074. cited by applicant ; Zirn et al., “All-trans retinoic acid treatment of Wilms tumor cells reverses expression of genes associated with high risk and relapse in vivo,” Oncogene (2005) 24(33):5246-5251. cited by applicant ; Butler et al., “Human cell-based artificial antigen-presenting cells for cancer immunotherapy,” Immunol Rev. (2014) 257(1):191-209. cited by applicant ; Clinical Trial Study Record No. NCT02435849, “Study of Efficacy and Safety of CTL019 in Pediatric ALL Patients,” (Eliana), May 6, 2015. cited by applicant ; Clinical Trial Study Record No. NCT02445248, “Study of Efficacy and Safety of CTL019 in Adult DLBCL Patients,” (Juliet), May 15, 2015. cited by applicant ; Meisenberg et al., “Reduced charges and costs associated with outpatient autologous stem cell transplantation,” Bone Marrow Transplant. (1998) 21(9):927-32. cited by applicant ; Myers et al., “Perspectives on outpatient administration of CAR-T cell therapy in aggressive B-cell lymphoma and acute lymphoblastic leukemia,” J Immunother Cancer. (2021) 9(4):e002056. cited by applicant ; Park et al. “Phase I trial of autologous CD19-targeted CAR-modified T cells as consolidation after purine analog-based first-line therapy in patients with previously untreated CLL,” Blood (Nov. 2013) 122(21):874. cited by applicant ; Slovin et al., “Adoptive Transfer of Autologous T Cells Targeted to Prostate Specific Membrane Antigen (PSMA) for the Treatment of Castrate Metastatic Prostate Cancer (CMPC) DOD,” Grant Log# PC081632, https://cdmrp.army.mil/pubs/video/pc/pdf/slovin_poster.pdf, 2013, poster presentation. cited by applicant ; Stiff et al., “Autologous hematopoietic stem cell transplants that utilize total body irradiation can safely be carried out entirely on an outpatient basis,” Bone Marrow Transplant. (2006) 38(11):757-64. cited by applicant
  • Primary Examiner: Shiao, Rei Tsang
  • Attorney, Agent or Firm: Morrison Foerster LLP

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